Solyc01g010310.4.1 (Solyc01g010310)


Aliases : Solyc01g010310

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 109.0)


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g010310.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00090370 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.04 OrthoFinder output from all 47 species
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.03 OrthoFinder output from all 47 species
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.05 OrthoFinder output from all 47 species
Aob_g21538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21102.t1 Aspi01Gene21102 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.03 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g50490.3 LOC_Os05g50490 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g012380.3.1 PDCB4, Solyc05g012380 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g29731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 22 92
No external refs found!