AMTR_s00066p00201540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.271

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase alpha complex.POLA2 replication fork tethering component


Gene families : OG_01_0004316 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004316_tree ,
OG_02_0004814 (LandPlants) Phylogenetic Tree(s): OG_02_0004814_tree ,
OG_03_0004335 (SeedPlants) Phylogenetic Tree(s): OG_03_0004335_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00201540
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.10 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 Archaeplastida
GSVIVT01010354001 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 Archaeplastida
Gb_31734 No alias replication fork tethering component POLA2 of DNA... 0.05 Archaeplastida
LOC_Os12g13950.1 No alias replication fork tethering component POLA2 of DNA... 0.02 Archaeplastida
MA_14020g0030 No alias replication fork tethering component POLA2 of DNA... 0.03 Archaeplastida
Mp6g03190.1 No alias replication fork tethering component POLA2 of DNA... 0.06 Archaeplastida
Solyc05g014540.3.1 No alias replication fork tethering component POLA2 of DNA... 0.04 Archaeplastida
Zm00001e039659_P001 No alias replication fork tethering component POLA2 of DNA... 0.03 Archaeplastida
GSVIVT01010354001 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.07 LandPlants
Gb_31734 No alias replication fork tethering component POLA2 of DNA... 0.04 LandPlants
Gb_41749 No alias replication fork tethering component POLA2 of DNA... 0.02 LandPlants
MA_14020g0030 No alias replication fork tethering component POLA2 of DNA... 0.03 LandPlants
Mp6g03190.1 No alias replication fork tethering component POLA2 of DNA... 0.06 LandPlants
Solyc05g014540.3.1 No alias replication fork tethering component POLA2 of DNA... 0.04 LandPlants
Zm00001e039659_P001 No alias replication fork tethering component POLA2 of DNA... 0.03 LandPlants
GSVIVT01010354001 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 SeedPlants
Gb_31734 No alias replication fork tethering component POLA2 of DNA... 0.04 SeedPlants
Gb_41749 No alias replication fork tethering component POLA2 of DNA... 0.02 SeedPlants
MA_14020g0030 No alias replication fork tethering component POLA2 of DNA... 0.03 SeedPlants
Solyc05g014540.3.1 No alias replication fork tethering component POLA2 of DNA... 0.04 SeedPlants
Zm00001e039659_P001 No alias replication fork tethering component POLA2 of DNA... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013627 Pol_alpha_B_N 16 238
IPR007185 DNA_pol_a/d/e_bsu 364 575
No external refs found!