Solyc01g008970.4.1 (UBA2A, Solyc01g008970)

Aliases : UBA2A, Solyc01g008970

Description : UBP1-associated protein 2A OS=Arabidopsis thaliana (sp|q9les2|uba2a_arath : 281.0)

Gene families : OG0000537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g008970.4.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g075156	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g102699	UBA2A	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Aev_g06608	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Aev_g28191	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ala_g21577	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Aob_g05082	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Aop_g01275	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Aop_g07973	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.06	OrthoFinder output from all 47 species
Aop_g30808	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0288.g063209	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Cba_g15611	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ceric.06G048800.1	Ceric.06G048800	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ceric.06G048900.1	Ceric.06G048900	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G045600.1	Ceric.26G045600	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Dac_g05700	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Dde_g00607	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Dde_g25283	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ehy_g03502	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ehy_g13432	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01037491001	UBA2A	UBP1-associated protein 2A OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_04917	No alias	UBP1-associated protein 2C OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g09139	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Len_g10422	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Len_g30942	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Lfl_g20949	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
MA_129986g0010	No alias	UBP1-associated protein 2B OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
MA_158497g0010	No alias	UBP1-associated protein 2C OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_287080g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_3634858g0010	No alias	UBP1-associated protein 2C OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_8212g0010	No alias	UBP1-associated protein 2C OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Msp_g07398	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Nbi_g09357	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ore_g05902	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Ore_g07551	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g09828	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.04	OrthoFinder output from all 47 species
Ore_g10985	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g11270	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g26188	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g43641	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Ore_g45365	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Pir_g48132	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015184	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023148	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Sam_g09751	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Sam_g27588	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Smo163608	No alias	UBP1-associated protein 2C OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Spa_g07595	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30878	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Spa_g38080	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species
Tin_g05151	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.02	OrthoFinder output from all 47 species
Tin_g13918	No alias	regulatory protein *(UBA1/2) of UBP1 activity & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	256	325
IPR000504	RRM_dom	158	220

External Links

No external refs found!

Solyc01g008970.4.1 (UBA2A, Solyc01g008970)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation