LOC_Os03g15890.1


Description : Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana (sp|q84th4|sr45a_arath : 105.0)


Gene families : OG_01_0001100 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001100_tree ,
OG_02_0001443 (LandPlants) Phylogenetic Tree(s): OG_02_0001443_tree ,
OG_03_0001574 (SeedPlants) Phylogenetic Tree(s): OG_03_0001574_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g15890.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024805001 No alias Serine/arginine-rich splicing factor SR45a... 0.03 Archaeplastida
Gb_20180 No alias Serine/arginine-rich splicing factor SR45a... 0.2 Archaeplastida
Gb_39431 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10435789g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_112005g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_125930g0010 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida
Pp3c18_16140V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc03g033310.4.1 No alias Serine/arginine-rich splicing factor SR45a... 0.03 Archaeplastida
GSVIVT01024805001 No alias Serine/arginine-rich splicing factor SR45a... 0.03 LandPlants
Gb_20180 No alias Serine/arginine-rich splicing factor SR45a... 0.17 LandPlants
MA_10435789g0020 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c18_16140V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
Solyc03g033310.4.1 No alias Serine/arginine-rich splicing factor SR45a... 0.03 LandPlants
GSVIVT01024805001 No alias Serine/arginine-rich splicing factor SR45a... 0.03 SeedPlants
Gb_20180 No alias Serine/arginine-rich splicing factor SR45a... 0.17 SeedPlants
MA_10435789g0020 No alias no hits & (original description: none) 0.04 SeedPlants
MA_125930g0010 No alias Serine/arginine-rich splicing factor SR45a... 0.02 SeedPlants
Solyc03g033310.4.1 No alias Serine/arginine-rich splicing factor SR45a... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 45 114
No external refs found!