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  5. Solyc01g007780.4.1

Solyc01g007780.4.1 (Solyc01g007780)


Aliases : Solyc01g007780

Description : HVA22-like protein i OS=Arabidopsis thaliana (sp|q8le10|ha22i_arath : 207.0)


Gene families : OG0000762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g007780.4.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G19950 HVA22H HVA22-like protein H (ATHVA22H) 0.02 OrthoFinder output from all 47 species
Aspi01Gene17828.t1 Aspi01Gene17828 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000453 No alias not classified & original description: CDS=159-932 0.03 OrthoFinder output from all 47 species
Ceric.20G054100.1 Ceric.20G054100 not classified & original description: pacid=50566693... 0.02 OrthoFinder output from all 47 species
Dcu_g09540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16518 HVA22J not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61961 HVA22J not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g03340 HVA22J not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 19 97
No external refs found!