Solyc01g006370.3.1 (gsl12, ATGSL12, Solyc01g006370)

Aliases : gsl12, ATGSL12, Solyc01g006370

Description : callose synthase

Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g006370.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00098420	gsl12, ATGSL12,...	Cell wall.callose.callose synthase	0.05	OrthoFinder output from all 47 species
AMTR_s00150p00030620	GLS2, ATGSL02,...	Cell wall.callose.callose synthase	0.04	OrthoFinder output from all 47 species
AT5G13000	gsl12, ATGSL12	glucan synthase-like 12	0.04	OrthoFinder output from all 47 species
Adi_g018496	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33737	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g37113	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05730	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08289	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g21799	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene39808.t1	GLS2, ATGSL02,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0004.g008797	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=451-5940	0.03	OrthoFinder output from all 47 species
Azfi_s0175.g055987	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: CDS=244-5988	0.03	OrthoFinder output from all 47 species
Cba_g73801	GLS2, ATGSL02, CALS5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g31774	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g22330	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g32999	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g46282	ATGSL10, gsl10, CALS9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08390	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09376	GSL03, ATGSL3, ATGSL03	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01025362001	gsl12, ATGSL12	Cell wall.callose.callose synthase	0.05	OrthoFinder output from all 47 species
GSVIVT01025370001	ATGSL10, gsl10, CALS9	Cell wall.callose.callose synthase	0.04	OrthoFinder output from all 47 species
Gb_01752	ATGSL10, gsl10, CALS9	callose synthase	0.05	OrthoFinder output from all 47 species
Gb_06219	gsl12, ATGSL12	callose synthase	0.07	OrthoFinder output from all 47 species
Gb_22029	ATGSL08, ATGSL8,...	callose synthase	0.03	OrthoFinder output from all 47 species
Gb_37962	GSL5, PMR4,...	callose synthase	0.03	OrthoFinder output from all 47 species
LOC_Os01g34930.1	GSL7, ATGSL07,...	callose synthase	0.03	OrthoFinder output from all 47 species
LOC_Os06g51270.1	gsl12, ATGSL12,...	callose synthase	0.05	OrthoFinder output from all 47 species
Len_g08360	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g10457	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g15686	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g24615	ATGSL10, gsl10, CALS9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g24830.1	GLS2, ATGSL02, CALS5	callose synthase	0.05	OrthoFinder output from all 47 species
Nbi_g03219	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g06339	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13514	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g23902	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g25483	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g36086	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g51529	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13802	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g53395	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59350	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g14024	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50509	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Smo267830	GLS2, ATGSL02, CALS5	Cell wall.callose.callose synthase	0.03	OrthoFinder output from all 47 species
Spa_g39785	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g51863	ATGSL01, GSL01,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013335_P001	gsl12, ATGSL12,...	callose synthase	0.04	OrthoFinder output from all 47 species
Zm00001e019786_P001	ATGSL01, GSL01,...	callose synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	HCCA
BP	GO:0009245	lipid A biosynthetic process	IEP	HCCA
BP	GO:0009247	glycolipid biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046493	lipid A metabolic process	IEP	HCCA
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	HCCA
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR039431	Vta1/CALS_N	41	168
IPR003440	Glyco_trans_48	1048	1759
IPR026899	FKS1-like_dom1	318	430

External Links

No external refs found!

Solyc01g006370.3.1 (gsl12, ATGSL12, Solyc01g006370)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation