Solyc01g005780.1.1 (RLP53, AtRLP53, Solyc01g005780)


Aliases : RLP53, AtRLP53, Solyc01g005780

Description : Receptor-like protein Cf-9 homolog OS=Solanum lycopersicum (sp|o49879|cf0_sollc : 942.0)


Gene families : OG0007843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007843_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005780.1.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Solyc03g082780.3.1 RLP37, AtRLP37,... Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
Solyc12g099870.3.1 RLP19, AtRLP19,... Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc12g100010.1.1 AtRLP6, RLP6,... Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 645 670
IPR001611 Leu-rich_rpt 143 164
IPR001611 Leu-rich_rpt 575 631
IPR001611 Leu-rich_rpt 431 490
IPR001611 Leu-rich_rpt 266 323
IPR001611 Leu-rich_rpt 194 251
IPR013210 LRR_N_plant-typ 29 86
IPR001611 Leu-rich_rpt 359 380
IPR001611 Leu-rich_rpt 114 130
No external refs found!