Solyc01g005550.3.1 (Solyc01g005550)


Aliases : Solyc01g005550

Description : no hits & (original description: none)


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005550.3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00062100 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00068770 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
AT1G70550 No alias Protein of Unknown Function (DUF239) 0.06 OrthoFinder output from all 47 species
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT5G50150 No alias Protein of Unknown Function (DUF239) 0.07 OrthoFinder output from all 47 species
Adi_g072910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02717.t1 Aspi01Gene02717 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010998 No alias not classified & original description: CDS=171-824 0.03 OrthoFinder output from all 47 species
Azfi_s2792.g113104 No alias not classified & original description: CDS=1-636 0.03 OrthoFinder output from all 47 species
Cba_g16541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G061800.1 Ceric.09G061800 not classified & original description: pacid=50587848... 0.05 OrthoFinder output from all 47 species
Ceric.1Z182300.1 Ceric.1Z182300 not classified & original description: pacid=50576865... 0.04 OrthoFinder output from all 47 species
Ceric.21G046500.1 Ceric.21G046500 not classified & original description: pacid=50603415... 0.04 OrthoFinder output from all 47 species
Ceric.26G037500.1 Ceric.26G037500 not classified & original description: pacid=50599180... 0.04 OrthoFinder output from all 47 species
Dac_g07917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g59240.1 LOC_Os03g59240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g38590.1 LOC_Os07g38590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g13261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_1134g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025098 No alias not classified & original description: CDS=473-1768 0.03 OrthoFinder output from all 47 species
Sam_g38438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006081_P001 Zm00001e006081 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e016772_P001 Zm00001e016772 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020747_P001 Zm00001e020747 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033077_P002 Zm00001e033077 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 197 419
IPR025521 Neprosin_propep 62 184
No external refs found!