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  5. Solyc00g500298.1.1

Solyc00g500298.1.1 (RPL2.1, Solyc00g500298)


Aliases : RPL2.1, Solyc00g500298

Description : 50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi (sp|p21434|rk2_nicde : 254.0)


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500298.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00011090 RPL2.1,... 50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda 0.03 OrthoFinder output from all 47 species
ATCG00830 RPL2.1 ribosomal protein L2 0.06 OrthoFinder output from all 47 species
ATCG01310 RPL2.2 ribosomal protein L2 0.06 OrthoFinder output from all 47 species
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g02244 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g13898 RPL2.1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g03784 No alias component *(uL2m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g04596 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.04 OrthoFinder output from all 47 species
Ceric.05G048500.1 RPL2.1, Ceric.05G048500 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.05 OrthoFinder output from all 47 species
Ceric.25G023800.1 Ceric.25G023800 not classified & original description: pacid=50593099... 0.05 OrthoFinder output from all 47 species
Ceric.38G009500.1 RPL2.1, Ceric.38G009500 not classified & original description: pacid=50580350... 0.04 OrthoFinder output from all 47 species
Cre07.g348850 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.01 OrthoFinder output from all 47 species
Dcu_g49833 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Gb_17475 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.04 OrthoFinder output from all 47 species
Gb_20139 RPL2.1 component psRPS11 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Gb_24024 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.04 OrthoFinder output from all 47 species
Gb_25047 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.04 OrthoFinder output from all 47 species
Gb_37512 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 40 116
No external refs found!