Aliases : RPS11, Solyc00g500075
Description : component psRPS11 of small ribosomal subunit proteome
Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00750 | RPS11 | ribosomal protein S11 | 0.09 | OrthoFinder output from all 47 species | |
Aev_g01915 | RPS11 | component *(uS11m) of small mitoribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
Aev_g37240 | RPS11 | component *(uS11c) of small plastid ribosomal-subunit... | 0.2 | OrthoFinder output from all 47 species | |
Azfi_s0027.g023689 | No alias | not classified & original description: CDS=1-321 | 0.05 | OrthoFinder output from all 47 species | |
Ceric.05G042000.1 | RPS11, Ceric.05G042000 | component *(uS11c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.05G049400.1 | RPS11, Ceric.05G049400 | component *(uS11c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.1Z122600.1 | RPS11, Ceric.1Z122600 | not classified & original description: pacid=50617110... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.1Z196300.1 | RPS11, Ceric.1Z196300 | not classified & original description: pacid=50586509... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.1Z237100.1 | RPS11, Ceric.1Z237100 | not classified & original description: pacid=50569351... | 0.08 | OrthoFinder output from all 47 species | |
Gb_08606 | NFD3 | component mtRPS11 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g16838.1 | RPS11, LOC_Os04g16838 | component psRPS11 of small ribosomal subunit proteome | 0.22 | OrthoFinder output from all 47 species | |
LOC_Os10g21332.1 | RPS11, LOC_Os10g21332 | component psRPS11 of small ribosomal subunit proteome | 0.22 | OrthoFinder output from all 47 species | |
Mp4g09870.1 | No alias | Ribosomal protein S11, mitochondrial OS=Marchantia... | 0.11 | OrthoFinder output from all 47 species | |
Mpzg00730.1 | No alias | component psRPS11 of small ribosomal subunit proteome | 0.12 | OrthoFinder output from all 47 species | |
Nbi_g20255 | RPS11 | component *(uS11m) of small mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g07424 | RPS11 | not classified & original description: none | 0.13 | OrthoFinder output from all 47 species | |
Tin_g21094 | RPS11 | component *(uS11m) of small mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001971 | Ribosomal_S11 | 28 | 137 |
No external refs found! |