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  5. Solyc00g500061.1.1

Solyc00g500061.1.1 (NDHJ, Solyc00g500061)


Aliases : NDHJ, Solyc00g500061

Description : component NdhJ of NDH subcomplex A


Gene families : OG0010313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500061.1.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00014280 PSBG,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
ATCG00420 NDHJ NADH dehydrogenase subunit J 0.4 OrthoFinder output from all 47 species
Aev_g09764 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.29 OrthoFinder output from all 47 species
Als_g14163 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Aob_g00848 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.02G013700.1 NDHJ, Ceric.02G013700 component *(NdhJ) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.07G092500.1 NDHJ, Ceric.07G092500 not classified & original description: pacid=50627119... 0.11 OrthoFinder output from all 47 species
Ceric.09G048100.1 NDHJ, Ceric.09G048100 component *(NdhJ) of NDH subcomplex A & original... 0.33 OrthoFinder output from all 47 species
Ceric.27G005900.1 NDHJ, Ceric.27G005900 component *(NdhJ) of NDH subcomplex A & original... 0.33 OrthoFinder output from all 47 species
Ceric.29G033000.1 NDHJ, Ceric.29G033000 not classified & original description: pacid=50625359... 0.03 OrthoFinder output from all 47 species
Gb_17982 NDHJ NAD(P)H-quinone oxidoreductase subunit J, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os01g58024.1 NDHJ, LOC_Os01g58024 component NdhJ of NDH subcomplex A 0.44 OrthoFinder output from all 47 species
LOC_Os10g38212.1 NDHJ, LOC_Os10g38212 component NdhJ of NDH subcomplex A 0.44 OrthoFinder output from all 47 species
Lfl_g17288 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.2 OrthoFinder output from all 47 species
Ore_g10963 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.23 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001268 NADH_UbQ_OxRdtase_30kDa_su 30 148
No external refs found!