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  5. Solyc00g500022.1.1

Solyc00g500022.1.1 (RPS18, Solyc00g500022)


Aliases : RPS18, Solyc00g500022

Description : component psRPS18 of small ribosomal subunit proteome


Gene families : OG0003437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500022.1.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00650 RPS18 ribosomal protein S18 0.22 OrthoFinder output from all 47 species
Ceric.01G105500.1 RPS18, Ceric.01G105500 component *(bS18c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.05G041200.1 RPS18, Ceric.05G041200 component *(bS18c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.28G030100.1 RPS18, Ceric.28G030100 component *(bS18c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ceric.38G007700.1 RPS18, Ceric.38G007700 component *(bS18c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39716.1 RPS18, LOC_Os06g39716 component psRPS18 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os08g15308.1 RPS18, LOC_Os08g15308 component psRPS18 of small ribosomal subunit proteome 0.24 OrthoFinder output from all 47 species
LOC_Os10g21312.1 RPS18, LOC_Os10g21312 component psRPS18 of small ribosomal subunit proteome 0.22 OrthoFinder output from all 47 species
Smo9213 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Zm00001e042027_P001 RPS18, Zm00001e042027 component psRPS18 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Zm00001e042146_P001 RPS18, Zm00001e042146 component psRPS18 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 26 75
No external refs found!