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  5. Solyc00g020020.2.1

Solyc00g020020.2.1 (Solyc00g020020)


Aliases : Solyc00g020020

Description : no hits & (original description: none)


Gene families : OG0006595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g020020.2.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
ATCG00500 ACCD acetyl-CoA carboxylase carboxyl transferase subunit beta 0.1 OrthoFinder output from all 47 species
Aev_g18312 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.08 OrthoFinder output from all 47 species
Ala_g08050 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.04 OrthoFinder output from all 47 species
Als_g01688 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.06 OrthoFinder output from all 47 species
Azfi_s2277.g110160 ACCD not classified & original description: CDS=1-426 0.03 OrthoFinder output from all 47 species
Ceric.05G049800.1 ACCD, Ceric.05G049800 not classified & original description: pacid=50578464... 0.07 OrthoFinder output from all 47 species
Ceric.1Z018100.1 ACCD, Ceric.1Z018100 not classified & original description: pacid=50586349... 0.02 OrthoFinder output from all 47 species
Ceric.29G033500.1 ACCD, Ceric.29G033500 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.38G006600.1 ACCD, Ceric.38G006600 EC_6.4 ligase forming carbon-carbon bond & original... 0.06 OrthoFinder output from all 47 species
Gb_03850 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.06 OrthoFinder output from all 47 species
Gb_06829 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.04 OrthoFinder output from all 47 species
Gb_09759 ACCD Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.07 OrthoFinder output from all 47 species
Gb_15504 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.06 OrthoFinder output from all 47 species
Gb_17284 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Nbi_g00478 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.08 OrthoFinder output from all 47 species
Solyc00g500065.1.1 ACCD, Solyc00g500065 component PsaI of PS-I complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!