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  5. Smo99956

Smo99956


Description : Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo99956

Target Alias Description ECC score Gene Family Method Actions
Adi_g052746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31538 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19690 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54815.t1 Aspi01Gene54815 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63556.t1 Aspi01Gene63556 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0386.g067568 No alias not classified & original description: CDS=62-952 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001155.3 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species
Dde_g06957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g02210.2 LOC_Os08g02210 Beta-carotene isomerase D27, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g47603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11491 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26733 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19910 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62487 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017141 No alias carotenoid isomerase *(DWARF27) & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g05404 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025114 D27-like_C 149 231
No external refs found!