Smo99066

Description : Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter

Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo99066
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
Ceric.13G063800.1	COPT5, Ceric.13G063800	copper transporter *(COPT) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g24804	COPT2	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g26532	COPT1	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os05g35050.1	COPT1, LOC_Os05g35050	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
Len_g42407	COPT5	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g005825.1.1	COPT1, Solyc06g005825	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	31	72

External Links

No external refs found!