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  5. Smo98534

Smo98534 (SPA4)


Aliases : SPA4

Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.SPA regulator component


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98534

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00174010 SPA3,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00097p00139510 SPA2,... External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
AT1G53090 SPA4 SPA1-related 4 0.04 OrthoFinder output from all 47 species
AT3G15354 SPA3 SPA1-related 3 0.05 OrthoFinder output from all 47 species
Adi_g008850 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Adi_g015282 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Aev_g06797 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Aev_g26019 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Aev_g48519 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Ala_g09701 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Als_g24085 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.06 OrthoFinder output from all 47 species
Als_g51184 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Aob_g02304 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Aop_g39226 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008529 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.06 OrthoFinder output from all 47 species
Azfi_s0014.g013675 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Azfi_s0560.g076943 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Cba_g15102 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Ceric.12G047000.1 SPA4, Ceric.12G047000 regulatory component *(SPA) of COP1-SPA light signal... 0.01 OrthoFinder output from all 47 species
Ceric.22G021600.1 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Cre02.g085050 FUS1, EMB168,... E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g20526 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Dac_g44670 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Dde_g09629 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Dde_g23991 SPA4 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ehy_g14133 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
GSVIVT01007271001 FUS1, EMB168,... External stimuli response.light.red/far red... 0.05 OrthoFinder output from all 47 species
GSVIVT01014332001 SPA4 Protein SPA1-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01020559001 SPA3 Protein modification.phosphorylation.PEK kinase 0.05 OrthoFinder output from all 47 species
LOC_Os01g52640.3 SPA4, LOC_Os01g52640 protein kinase (PEK) 0.05 OrthoFinder output from all 47 species
LOC_Os02g53140.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 OrthoFinder output from all 47 species
Len_g13907 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Lfl_g04186 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Lfl_g12926 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
MA_423393g0010 SPA3 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species
Msp_g14662 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Msp_g18911 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.06 OrthoFinder output from all 47 species
Nbi_g06333 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.06 OrthoFinder output from all 47 species
Nbi_g11726 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Ore_g26130 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Pir_g13039 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Ppi_g03935 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Ppi_g49237 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Solyc07g063120.4.1 SPA3, Solyc07g063120 protein kinase (PEK). regulator component SPA of... 0.05 OrthoFinder output from all 47 species
Solyc11g011980.3.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.01 OrthoFinder output from all 47 species
Solyc12g013840.3.1 SPA3, Solyc12g013840 protein kinase (PEK). regulator component SPA of... 0.06 OrthoFinder output from all 47 species
Spa_g26103 FUS1, EMB168,... component *(COP1) of COP1-Spa light signal transduction... 0.03 OrthoFinder output from all 47 species
Tin_g09992 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Tin_g19820 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Zm00001e015983_P001 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 OrthoFinder output from all 47 species
Zm00001e019928_P005 SPA4, Zm00001e019928 protein kinase (PEK). regulator component SPA of... 0.05 OrthoFinder output from all 47 species
Zm00001e028209_P002 SPA4, Zm00001e028209 protein kinase (PEK). regulator component SPA of... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
CC GO:0031082 BLOC complex IEP HCCA
CC GO:0031083 BLOC-1 complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 588 623
No external refs found!