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  5. Smo98227

Smo98227 (AGO1)


Aliases : AGO1

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98227
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00114260 AGO2,... Chromatin organisation.DNA methylation.canonical... 0.05 OrthoFinder output from all 47 species
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AT1G31290 AGO3 ARGONAUTE 3 0.02 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g18592 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68511.t1 AGO1, Aspi01Gene68511 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01001941001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030512001 AGO6 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os03g47830.1 AGO5, LOC_Os03g47830 Protein argonaute 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g12529 AGO7, ZIP not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_47087g0010 AGO4, OCP11 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g03218 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Msp_g14613 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Pir_g40206 AGO5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069280.2.1 AGO2, Solyc02g069280 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Solyc03g111760.3.1 AGO4, OCP11,... Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Spa_g05727 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Spa_g23108 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR014811 ArgoL1 296 344
No external refs found!