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  5. Smo96540

Smo96540 (AtLIG6, LIG6)


Aliases : AtLIG6, LIG6

Description : DNA ligase 6 OS=Arabidopsis thaliana


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo96540
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00244350 SNM1, ATSNM1,... DNA damage response.DNA repair mechanisms.interstrand... 0.03 OrthoFinder output from all 47 species
Aev_g11248 SNM1, ATSNM1 interstrand crosslink repair factor *(SNM) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02014 SNM1, ATSNM1 interstrand crosslink repair factor *(SNM) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g46686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 64 184
No external refs found!