Smo93321


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo93321
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.11 OrthoFinder output from all 47 species
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g002869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003294 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005693 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010621 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010848 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013973 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036562 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g036787 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056053 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111309 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18769 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55316 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07081 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09708 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12659.t1 Aspi01Gene12659 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene21963.t1 Aspi01Gene21963 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.02 OrthoFinder output from all 47 species
Cba_g06940 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20760 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27524 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75094 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.02 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.02 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.02 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.02 OrthoFinder output from all 47 species
Dac_g42860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26464 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g46329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009974001 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
Len_g04340 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18973 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22995 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g34158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08420 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10692 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12945 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g33292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g39249 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16145 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
Spa_g16937 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g17850 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g18963 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 703 727
No external refs found!