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  5. Smo93050

Smo93050 (emb2004)


Aliases : emb2004

Description : RAN GTPase-activating protein 1 OS=Arabidopsis thaliana


Gene families : OG0006225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo93050

Target Alias Description ECC score Gene Family Method Actions
Aev_g07229 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05323 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15959 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G006400.1 emb2004, Ceric.29G006400 not classified & original description: pacid=50625910... 0.02 OrthoFinder output from all 47 species
Dcu_g11648 emb2004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020179001 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g01858 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g21830.1 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g53011 emb2004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g006170.4.1 emb2004, Solyc05g006170 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036062_P001 emb2004, Zm00001e036062 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 319 338
No external refs found!