LOC_Os10g22950 (Os10g0375600)


Aliases : Os10g0375600

Description : 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses. signal responsive 1 (SR1)


Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g22950
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.02 Gene family
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.04 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.05 Gene family
GSVIVT01017670001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
Smo441667 PACid_15409450 No description available 0.02 Gene family
Solyc01g105230.3.1 Solyc01g105230.3 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
Solyc04g056270.3.1 Solyc04g056270.3 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
Zm00001d022185 GRMZM2G017368 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 866 885
IPR000048 IQ_motif_EF-hand-BS 842 861
IPR002909 IPT_dom 444 522
IPR005559 CG-1_dom 24 137
No external refs found!