Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor
Gene families : OG0003109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo92242 | |
Cluster | HCCA: Cluster_90 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G02990 | No alias | Mitochondrial transcription termination factor family protein | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011061001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g54200.1 | LOC_Os02g54200 | transcription factor (mTERF). mTERF mitochondrial RNA... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g33500.1 | LOC_Os05g33500 | transcription factor (mTERF). mTERF4 plastidial RNA... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g22560.1 | No alias | transcription factor (mTERF) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02415 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g17301 | No alias | mTERF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14962 | No alias | mTERF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027106_P001 | Zm00001e027106 | transcription factor (mTERF). mTERF4 plastidial RNA... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 131 | 440 |
No external refs found! |