- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : NCED3, SIS7, STO1, ATNCED3
Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.NCED carotenoid cleavage dioxygenase
Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00253450 | ATCCD1, CCD1,... | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25800 | NCED3, SIS7,... | EC_1.13 oxidoreductase acting on single donor with... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g48845 | NCED3, SIS7,... | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g38712 | NCED3, SIS7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_41906g0010 | ATCCD1, CCD1,... | Carotenoid 9,10(9,10)-cleavage dioxygenase 1... | 0.02 | OrthoFinder output from all 47 species | |
| MA_90573g0010 | CCD4, NCED4 | carotenoid cleavage dioxygenase (CCD4) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57367 | NCED3, SIS7,... | EC_1.13 oxidoreductase acting on single donor with... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g61521 | NCED3, SIS7,... | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10352 | No alias | EC_1.13 oxidoreductase acting on single donor with... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37014 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo91529 | NCED6, ATNCED6 | No description available | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004294 | Carotenoid_Oase | 96 | 561 |
| No external refs found! |