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  5. Smo90809

Smo90809


Description : Protein HOTHEAD OS=Arabidopsis thaliana


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90809
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
AT1G73050 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 OrthoFinder output from all 47 species
Adi_g055034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1527.g104149 No alias not classified & original description: CDS=163-1728 0.06 OrthoFinder output from all 47 species
Azfi_s2046.g108872 No alias not classified & original description: CDS=162-1706 0.05 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.04 OrthoFinder output from all 47 species
Dcu_g44207 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45530.1 LOC_Os02g45530 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02700.1 LOC_Os03g02700 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g48400.1 LOC_Os04g48400 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g59481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g23738 EDA17, HTH not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16242 EDA17, HTH not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo410833 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g035580.3.1 Solyc06g035580 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e007199_P001 Zm00001e007199 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 24 297
No external refs found!