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  5. Smo90720

Smo90720 (ARR11)


Aliases : ARR11

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00108840 ARR1, RR1,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Adi_g080126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081824 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06505 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ala_g07229 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g50793 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07827.t1 RR14, ARR14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45257.t1 ARR1, RR1,... subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009615 ARR10, RR10 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g02572 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Dac_g38324 RR14, ARR14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39811 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05928 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00604 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.01 OrthoFinder output from all 47 species
LOC_Os02g55320.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Len_g24821 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_103946g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Ore_g17420 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42997 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00968 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g09446 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g20416 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ppi_g02352 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05785 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12654 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001234 RR12, ARR12 subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc04g008050.4.1 ARR1, RR1, Solyc04g008050 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Solyc12g010330.2.1 RR18, ARR18,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 20 128
No external refs found!