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  5. Smo90549

Smo90549 (UVH1, ATRAD1, RAD1)


Aliases : UVH1, ATRAD1, RAD1

Description : DNA repair endonuclease UVH1 OS=Arabidopsis thaliana


Gene families : OG0005132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90549
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000808.48 UVH1, ATRAD1, RAD1 DNA repair endonuclease UVH1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os03g01100.1 UVH1, ATRAD1,... XPF component of DNA repair endonuclease complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024411 UVH1, ATRAD1, RAD1 component *(XPF) of DNA repair endonuclease complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR006166 ERCC4_domain 706 835
No external refs found!