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  5. Smo89607

Smo89607


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo89607
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT5G24870 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Gb_30059 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os08g14320.1 LOC_Os08g14320 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Nbi_g04359 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 79 121
No external refs found!