Smo89456 (emb1354, CDC48C)

Aliases : emb1354, CDC48C

Description : Cell division control protein 48 homolog C OS=Arabidopsis thaliana

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo89456
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Aev_g04868	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20068	CIP111	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62956.t1	CDC48B, Aspi01Gene62956	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g32334	CIP111	platform ATPase CDC48 & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09970	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os08g31870.1	LOC_Os08g31870	platform ATPase (CDC48)	0.02	OrthoFinder output from all 47 species
MA_10427366g0010	CDC48B	Cell division control protein 48 homolog B...	0.03	OrthoFinder output from all 47 species
Mp1g25630.1	No alias	platform ATPase (CDC48)	0.02	OrthoFinder output from all 47 species
Msp_g20925	CIP111	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08291	emb1354, CDC48C	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g19659	CIP111	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	44	184

External Links

No external refs found!