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  5. LOC_Os03g13100.1

LOC_Os03g13100.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_01_0000511 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000511_tree ,
OG_02_0003960 (LandPlants) Phylogenetic Tree(s): OG_02_0003960_tree ,
OG_03_0004443 (SeedPlants) Phylogenetic Tree(s): OG_03_0004443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13100.1
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_10432539g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c4_29960V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo180454 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Zm00001e007730_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Zm00001e024244_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 LandPlants
Pp3c4_29960V3.1 No alias RING/U-box superfamily protein 0.02 LandPlants
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 208 270
IPR002867 IBR_dom 286 327
No external refs found!