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  5. Smo88014

Smo88014


Description : Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo88014
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00235750 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
Adi_g054516 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57962.t1 Aspi01Gene57962 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010582 No alias 5,10-methenyl-THF synthetase & original description: CDS=1-1530 0.04 OrthoFinder output from all 47 species
Ceric.27G024200.1 Ceric.27G024200 5,10-methenyl-THF synthetase & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g52013 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21086 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g07020.1 LOC_Os12g07020 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species
Lfl_g01289 No alias 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48305 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35372 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06813 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30533 No alias 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31772 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002698 FTHF_cligase 68 267
No external refs found!