AMTR_s00066p00190730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.242

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG_01_0000167 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000167_tree ,
OG_02_0000303 (LandPlants) Phylogenetic Tree(s): OG_02_0000303_tree ,
OG_03_0004976 (SeedPlants) Phylogenetic Tree(s): OG_03_0004976_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00190730
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g41820.1 No alias transcription factor (bZIP) 0.02 Archaeplastida
Pp3c19_15700V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 Archaeplastida
Pp3c19_15710V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 Archaeplastida
Pp3c22_13810V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.03 Archaeplastida
Solyc04g071160.3.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Solyc06g048630.3.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Zm00001e018460_P001 No alias transcription factor (bZIP) 0.02 Archaeplastida
Zm00001e021397_P001 No alias transcription factor (bZIP) 0.02 Archaeplastida
Gb_16507 No alias transcription factor (bZIP) 0.02 LandPlants
LOC_Os04g41820.1 No alias transcription factor (bZIP) 0.02 LandPlants
Mp3g00600.1 No alias transcription factor (bZIP) 0.02 LandPlants
Pp3c19_15700V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 LandPlants
Pp3c19_15710V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 LandPlants
Pp3c22_13810V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 LandPlants
Solyc04g071160.3.1 No alias transcription factor (bZIP) 0.03 LandPlants
Solyc04g081190.3.1 No alias transcription factor (bZIP) 0.02 LandPlants
Solyc06g048630.3.1 No alias transcription factor (bZIP) 0.03 LandPlants
Zm00001e018460_P001 No alias transcription factor (bZIP) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004827 bZIP 200 251
No external refs found!