Smo84056 (APO1)

Aliases : APO1

Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo84056

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022368	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.02	OrthoFinder output from all 47 species
Gb_29513	APO1	APO protein 1, chloroplastic OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Sam_g17814	No alias	organelle RNA splicing factor *(APO) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g009400.4.1	APO3, Solyc09g009400	APO protein 3, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e006942_P002	APO1, Zm00001e006942	APO protein 1, chloroplastic OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	251	365

External Links

No external refs found!