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  5. Smo84001

Smo84001


Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel


Gene families : OG0001870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo84001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g021081 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03915.t1 Aspi01Gene03915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11308 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.05 OrthoFinder output from all 47 species
Dde_g05959 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01038181001 No alias External stimuli response.biotic... 0.01 OrthoFinder output from all 47 species
Len_g09224 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species
Msp_g37203 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g044900.3.1 Solyc10g044900 cation channel (DMI1). calcium cation channel... 0.02 OrthoFinder output from all 47 species
Spa_g26229 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010420 CASTOR/POLLUX/SYM8_dom 309 407
No external refs found!