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  5. Smo82367

Smo82367


Description : Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0005577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005577_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo82367
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aev_g06596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06168 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g16206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72562.t1 Aspi01Gene72562 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0587.g078545 No alias not classified & original description: CDS=85-1572 0.05 OrthoFinder output from all 47 species
Cba_g13522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G032500.1 Ceric.08G032500 not classified & original description: pacid=50638582... 0.06 OrthoFinder output from all 47 species
Dac_g14854 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g24022 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g18676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016062001 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 OrthoFinder output from all 47 species
Gb_29248 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 OrthoFinder output from all 47 species
LOC_Os04g56320.1 LOC_Os04g56320 Ribulose bisphosphate carboxylase/oxygenase activase 2,... 0.09 OrthoFinder output from all 47 species
Len_g50097 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g04649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.06 OrthoFinder output from all 47 species
MA_379291g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g02450 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g06629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g58392 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g45761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020487 No alias not classified & original description: CDS=305-1777 0.02 OrthoFinder output from all 47 species
Sam_g29423 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g49192 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc03g117850.4.1 Solyc03g117850 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.07 OrthoFinder output from all 47 species
Tin_g21285 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 152 294
No external refs found!