Smo81522 (FTSH12, EMB36, EMB156, EMB1047)

Aliases : FTSH12, EMB36, EMB156, EMB1047

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component

Gene families : OG0008369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008369_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo81522
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00195710	FTSH12, EMB36,...	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Adi_g020303	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.04	OrthoFinder output from all 47 species
Azfi_s0059.g034668	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.04	OrthoFinder output from all 47 species
Cba_g02105	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Ceric.35G066800.1	FTSH12, EMB36,...	not classified & original description: pacid=50581576...	0.03	OrthoFinder output from all 47 species
Dde_g04915	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Ehy_g15728	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
GSVIVT01036763001	FTSH12, EMB36,...	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder output from all 47 species
Lfl_g04997	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.06	OrthoFinder output from all 47 species
MA_10426764g0010	FTSH12, EMB36,...	ATP-dependent zinc metalloprotease FTSH 12,...	0.03	OrthoFinder output from all 47 species
Mp3g06130.1	FTSH12, EMB36,...	component FtsH12 of protein translocation ATPase motor complex	0.08	OrthoFinder output from all 47 species
Ppi_g13347	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018984	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Solyc02g079000.4.1	FTSH12, EMB36,...	component FtsH12 of protein translocation ATPase motor complex	0.07	OrthoFinder output from all 47 species
Spa_g15771	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
CC	GO:0032039	integrator complex	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	152	301

External Links

No external refs found!

Smo81522 (FTSH12, EMB36, EMB156, EMB1047)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation