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Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015033 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11257 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g26069 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g36534 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g03803 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18266 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19058 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06487 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11093 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26670 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27565 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g28205 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37100 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g40241 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene17121.t1 | CRR22, Aspi01Gene17121 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18019.t1 | Aspi01Gene18019 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25867.t1 | Aspi01Gene25867 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35981.t1 | Aspi01Gene35981 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026000 | No alias | not classified & original description: CDS=1-2334 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0063.g035332 | No alias | not classified & original description: CDS=1-1728 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27583 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24746 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07622 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g08636 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g28005 | CRR2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g24299 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000936001 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002530001 | No alias | Pentatricopeptide repeat-containing protein At3g49710... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007974001 | No alias | Pentatricopeptide repeat-containing protein At5g61400... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010031001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01018597001 | No alias | RNA processing.organelle machineries.RNA... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01018877001 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01024061001 | No alias | Pentatricopeptide repeat-containing protein At2g21090... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030443001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036169001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037562001 | PDE247, CLB19 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15644 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15797 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38750 | No alias | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39702 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g42280.1 | CRR21, LOC_Os01g42280 | RNA editing factor (CRR21) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g03252 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03634 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03864 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03866 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05370 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g17774 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20556 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g34160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_114565g0020 | OTP84 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43041 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02832 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05937 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06477 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06851 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10282 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13340 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17170 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18431 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62708 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001817 | No alias | not classified & original description: CDS=1-3483 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g02448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08403 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10447 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12390 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16312 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36697 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g40724 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo132317 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g005280.1.1 | Solyc02g005280 | Pentatricopeptide repeat-containing protein At1g50270... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g082170.4.1 | Solyc09g082170 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g008940.1.1 | CRR2, Solyc11g008940 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23008 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26612 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 506 | 529 |
| No external refs found! |