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  5. Smo8109

Smo8109


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo8109

Target Alias Description ECC score Gene Family Method Actions
AT3G60080 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g05960 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g09386 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g62505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21809 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g20588 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g27734 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15447 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35084 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 28 70
No external refs found!