Smo80665

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit

Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo80665

Target	Alias	Description	ECC score	Gene Family Method
AT3G18190	No alias	TCP-1/cpn60 chaperonin family protein	0.05	OrthoFinder output from all 47 species
Aev_g03918	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Als_g13529	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01008363001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	OrthoFinder output from all 47 species
LOC_Os02g22780.1	LOC_Os02g22780	CCT4 subunit delta of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Mp6g14150.1	No alias	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Pir_g04542	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species
Pp3c19_7680V3.1	Pp3c19_7680	TCP-1/cpn60 chaperonin family protein	0.01	OrthoFinder output from all 47 species
Zm00001e000128_P002	Zm00001e000128	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	29	523

External Links

No external refs found!