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  5. Smo80470

Smo80470


Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo80470
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Aev_g08216 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g17243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33471.t1 Aspi01Gene33471 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33474.t1 Aspi01Gene33474 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g296950 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Dac_g23646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g09336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g01695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 3 61
No external refs found!