Aliases : AGL104
Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00254030 | SHP2, AGL5,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00047p00181740 | AGL7, AP1,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
AT2G26320 | AGL33 | AGAMOUS-like 33 | 0.03 | OrthoFinder output from all 47 species | |
AT4G11880 | AGL14 | AGAMOUS-like 14 | 0.03 | OrthoFinder output from all 47 species | |
AT4G37940 | AGL21 | AGAMOUS-like 21 | 0.04 | OrthoFinder output from all 47 species | |
AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene12156.t1 | AGL42, Aspi01Gene12156 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene15810.t1 | STK, AGL11,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene17818.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene68020.t1 | AGL6, Aspi01Gene68020 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0034.g025359 | No alias | not classified & original description: CDS=5-295 | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07446 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g01890.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os12g31748.2 | AGL8, FUL, LOC_Os12g31748 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Len_g44573 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_69370g0010 | AGL14 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g38833 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Pnu_g21886 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g27538 | AGL15 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g33302 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g005320.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g056620.2.1 | AGL7, AP1, Solyc05g056620 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018993_P001 | AGL62, Zm00001e018993 | transcription factor (MADS/AGL) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 54 |
No external refs found! |