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Aliases : SDG25, ATXR7
Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component
Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo78627 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g29753 | ATX3, SDG14 | class-III histone methyltransferase *(Trx) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g515050 | ATX3, SDG14 | Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g35730 | SDG25, ATXR7 | class-III histone methyltransferase *(Trx) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03190 | SDG25, ATXR7 | class-III histone methyltransferase *(Trx) & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001214 | SET_dom | 18 | 122 |
| No external refs found! |