1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo78122

Smo78122


Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78122
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cba_g13038 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66219 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18342 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016470 No alias histone demethylase *(JMJD6) & original description: CDS=5-1432 0.02 OrthoFinder output from all 47 species
Sam_g34209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22262 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13107 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!