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  5. LOC_Os03g11600.1

LOC_Os03g11600.1


Description : transcription factor (YABBY)


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0010937 (LandPlants) Phylogenetic Tree(s): OG_02_0010937_tree ,
OG_03_0010891 (SeedPlants) Phylogenetic Tree(s): OG_03_0010891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11600.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00096p00054100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.05 Archaeplastida
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc05g012050.4.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc05g012050.4.1 No alias transcription factor (YABBY) 0.03 LandPlants

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 6 148
No external refs found!