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  5. AMTR_s00066p00184560

AMTR_s00066p00184560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.232

Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor


Gene families : OG_01_0001906 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001906_tree ,
OG_02_0003339 (LandPlants) Phylogenetic Tree(s): OG_02_0003339_tree ,
OG_03_0003572 (SeedPlants) Phylogenetic Tree(s): OG_03_0003572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00184560
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.06 Archaeplastida
Cre01.g010864 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
Gb_17704 No alias PrfB-type translation peptide chain release factor 0.04 Archaeplastida
Gb_27626 No alias PrfB-type translation peptide chain release factor 0.01 Archaeplastida
MA_10437191g0010 No alias PrfB-type translation peptide chain release factor 0.06 Archaeplastida
Pp3c3_11640V3.1 No alias high chlorophyll fluorescent 109 0.02 Archaeplastida
Smo430253 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Smo75160 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc04g025290.4.1 No alias PrfB-type translation peptide chain release factor 0.11 Archaeplastida
Zm00001e035191_P002 No alias no hits & (original description: none) 0.1 Archaeplastida
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.06 LandPlants
Gb_17704 No alias PrfB-type translation peptide chain release factor 0.03 LandPlants
Gb_27626 No alias PrfB-type translation peptide chain release factor 0.01 LandPlants
MA_10437191g0010 No alias PrfB-type translation peptide chain release factor 0.06 LandPlants
Pp3c3_11640V3.1 No alias high chlorophyll fluorescent 109 0.02 LandPlants
Smo430253 No alias Protein biosynthesis.organelle translation... 0.02 LandPlants
Solyc04g025290.4.1 No alias PrfB-type translation peptide chain release factor 0.11 LandPlants
Zm00001e035191_P002 No alias no hits & (original description: none) 0.1 LandPlants
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.06 SeedPlants
Gb_17704 No alias PrfB-type translation peptide chain release factor 0.02 SeedPlants
Gb_27626 No alias PrfB-type translation peptide chain release factor 0.01 SeedPlants
MA_10437191g0010 No alias PrfB-type translation peptide chain release factor 0.05 SeedPlants
Solyc04g025290.4.1 No alias PrfB-type translation peptide chain release factor 0.09 SeedPlants
Zm00001e035191_P002 No alias no hits & (original description: none) 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
MF GO:0016149 translation release factor activity, codon specific IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 314 423
IPR005139 PCRF 171 279
No external refs found!