Smo75659


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo75659

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00181560 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015739 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057625 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22656 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46291 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22334.t1 Aspi01Gene22334 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47938.t1 CRR22, Aspi01Gene47938 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10642 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G062700.1 Ceric.28G062700 not classified & original description: pacid=50570794... 0.03 OrthoFinder output from all 47 species
Dac_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06891 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07839 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05342 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13048 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38610 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03012 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32250 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53029 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.02 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04172 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 96 119
No external refs found!