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  5. Smo75198

Smo75198


Description : LIMR family protein At5g01460 OS=Arabidopsis thaliana


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo75198

Target Alias Description ECC score Gene Family Method Actions
AT5G01460 No alias LMBR1-like membrane protein 0.03 OrthoFinder output from all 47 species
Adi_g055076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011127 No alias not classified & original description: CDS=78-1616 0.03 OrthoFinder output from all 47 species
Ceric.34G014800.1 Ceric.34G014800 not classified & original description: pacid=50622851... 0.09 OrthoFinder output from all 47 species
Cre01.g023400 No alias LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Len_g59363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10078g0020 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g12623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e036634_P001 Zm00001e036634 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 263 491
No external refs found!