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  5. Smo75047

Smo75047 (ATICE1, ICE1, SCRM)


Aliases : ATICE1, ICE1, SCRM

Description : External stimuli response.temperature.ICE-CBF cold acclimation transcriptional cascade.ICE1/2 transcription factor


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo75047
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.02 OrthoFinder output from all 47 species
LOC_Os11g32100.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.06 OrthoFinder output from all 47 species
MA_20585g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.05 OrthoFinder output from all 47 species
Mp4g04910.1 ATICE1, ICE1, SCRM transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp4g04920.1 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
Solyc12g088130.3.1 bHLH093, Solyc12g088130 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 7 49
No external refs found!