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  5. Smo74261

Smo74261 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo74261

Target Alias Description ECC score Gene Family Method Actions
Adi_g022517 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19734 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07518 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19316 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03808 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene35673.t1 PDS3, PDS,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015979 No alias not classified & original description: CDS=212-1885 0.02 OrthoFinder output from all 47 species
Cba_g26743 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G017400.1 PDS3, PDS,... not classified & original description: pacid=50621794... 0.08 OrthoFinder output from all 47 species
Ceric.25G032300.1 Ceric.25G032300 not classified & original description: pacid=50594452... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.03 OrthoFinder output from all 47 species
Dac_g13672 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09245 PDS3, PDS, PDE226 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g24435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01530 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06069 LDL3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47290.2 LOC_Os04g47290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06016 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g34904 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428599g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_580945g0010 LDL3 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g18160.1 PDS3, PDS, PDE226 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g10094 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g56449 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29749 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13831 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007260_P002 Zm00001e007260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 48 488
No external refs found!