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  5. Smo74254

Smo74254 (SBH2)


Aliases : SBH2

Description : Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase


Gene families : OG0001965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo74254

Target Alias Description ECC score Gene Family Method Actions
Als_g56562 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Dac_g16085 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
GSVIVT01020000001 SBH1 Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
LOC_Os06g12250.1 SBH2, LOC_Os06g12250 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
Len_g11278 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Lfl_g02855 SBH2 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Nbi_g27124 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Sam_g06377 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Zm00001e010816_P001 SBH1, Zm00001e010816 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
Zm00001e021464_P001 SBH2, Zm00001e021464 sphingobase hydroxylase 0.04 OrthoFinder output from all 47 species
Zm00001e023899_P002 SBH1, Zm00001e023899 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008593 regulation of Notch signaling pathway IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0045747 positive regulation of Notch signaling pathway IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 96 232
No external refs found!