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  5. Smo73360

Smo73360 (BHLH42, TT8)


Aliases : BHLH42, TT8

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo73360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G09820 BHLH42, TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G46760 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Ala_g03934 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15859 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14626 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30820 ATMYC2, MYC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37158 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05305.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07773.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046110 No alias bHLH-type transcription factor & original description: CDS=1-2184 0.02 OrthoFinder output from all 47 species
Azfi_s0277.g061489 No alias bHLH-type transcription factor & original description: CDS=1-1563 0.03 OrthoFinder output from all 47 species
Cba_g33047 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G025500.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G061300.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G060700.1 Ceric.15G060700 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G007700.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36294 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g14464 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MpVg00340.1 ATMYC2, MYC2,... No annotation 0.03 OrthoFinder output from all 47 species
Msp_g14442 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09679 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22324 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g076930.1.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g52382 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016369_P002 Zm00001e016369 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 225 272
No external refs found!